BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033E10LP1|AL429761
(859 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1624 1665 0.0
>3x_Contig1624
Length = 12551
Score = 1665 bits (838), Expect = 0.0
Identities = 854/860 (99%), Gaps = 1/860 (0%)
Strand = Plus / Plus
Query: 1 atatccacggccacgatggtgtttcagggtgaaaacacccccgacacaagcggtgagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1109 atatccacggccacgatggtgtttcagggtgaaaacacccccgacacaagcggtgagcac 1168
Query: 61 cggagttatctcctcactaccagggaccataacccagccgaccctgttcattgtttcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1169 cggagttatctcctcactaccagggaccataacccagccgaccctgttcattgtttcaca 1228
Query: 121 acttgccactatctgagacgtctttgatgtctcaggaagagttaaatccttcaacacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1229 acttgccactatctgagacgtctttgatgtctcaggaagagttaaatccttcaacacaaa 1288
Query: 181 atgcttgatacctaaatgtttagcattgtcctcgaacctatcaatatgatcaccactctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1289 atgcttgatacctaaatgtttagcattgtcctcgaacctatcaatatgatcaccactctt 1348
Query: 241 atgtaactgccctagttcactttgacccaaaatatgctctctgtcagcgtactcttcacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1349 atgtaactgccctagttcactttgacccaaaatatgctctctgtcagcgtactcttcacg 1408
Query: 301 acttagatattcaccactccatgtggaaccgttctgcaaatgagttaacctaatcacttc 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1409 acttagatattcaccactccatgtggaaccgttctgcaaatgagtaaacctaatcacttc 1468
Query: 361 tggatcgtcaacagcctcaaacttgacagatagagtcatccctgttttattaattttatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1469 tggatcgtcaacagcctcaaacttgacagatagagtcatccctgttttattaattttatg 1528
Query: 421 atttcccttagccatacgagtttcaacatatctaagagaagaccgactgawatgtactaa 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1529 atttcccttagccatacgagtttcaacatatctaagagaagaccgactgaaatgtactaa 1588
Query: 481 tgaagatttatatttgccctttatatatacgtttaactggaaaaacgagaaatactattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1589 tgaagatttatatttgccctttatatatacgtttaactggaaaaacgagaaatactattt 1648
Query: 541 cctatcgcatcgaattcctttattctaaatttaattctgcaaacgttaattacatgcgac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1649 cctatcgcatcgaattcctttattctaaatttaattctgcaaacgttaattacatgcgac 1708
Query: 601 tgcdataaaataaataaaataaacccttatacggataacttaaagaagattttctagtca 660
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1709 tgcaataaaataaataaaataaacccttatacggataacttaaagaagattttctagtca 1768
Query: 661 gccttaccttatagaaactagaagtttgcttccattgctgcagtttttctttgaaacg-a 719
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1769 gccttaccttatagaaactagaagtttgcttccattgctgcagtttttctttgaaacgaa 1828
Query: 720 rtattcttattatgcatatttgcttatttgttttaccttttctttccatatataaaacta 779
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1829 gtattcttattatgcatatttgcttatttgttttaccttgtctttccatatataaaacta 1888
Query: 780 tttcttagctgtgccaattcagtgatctacgccatttctatcaccaaatgctgcattagt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1889 tttcttagctgtgccaattcagtgatctacgccatttctatcaccaaatgctgcattagt 1948
Query: 840 cacctcatggcacctcggct 859
||||||||||||||||||||
Sbjct: 1949 cacctcatggcacctcggct 1968
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6262
Number of Sequences: 1807
Number of extensions: 6262
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 859
length of database: 10,358,551
effective HSP length: 16
effective length of query: 843
effective length of database: 10,329,639
effective search space: 8707885677
effective search space used: 8707885677
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)